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At long last, a map from the top down of the entire facility. Obviously, it doesn't really give the depth away, and the spaces are obviously not all just fucking squares. But I think it will help out enough with planning where you wish to go next. And hey, maybe in the future I can also give some maps of the deeper parts? Hahahaha... please don't ask me.
Anyway, as for misc spaces, these spaces can be a lot of things: Chemical plants, storage space, manufacturing, bunkers, arms depots, sleeping space for staff, etc. It's kinda the most broad area and isn't designated for one specific thing.
Also, drawanon, are you proud of me? I used some of your drawings as reference for what I drew, so I hope it came out to your liking.