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Before we start we know for a fact that only the first 3 gens protags were male. Now let's continue.
>Gen1
You become champ. Basic path really.
>Gen 6/7(SM)/4
Both of them own a legendary and as for gen4 protag she must defeat or catch Girantina to leave the distortion world meaning she is legendary 1 tier.
>Gen5
Now for her she also own a legendary but what makes her stand out is that she was dentined to have it. It was prophesied for that she edges over the previous 3.
>Gen7 USM/ Gen3 Oras/Gen8
They all possess world destroying legendaries.
>Gen5 BW2
She is ranked alongside them because she managed to defeat a world destroying legendary Pokemon. So she belongs in that tier.
>Gen2 Hgss
He has Arceus. He owns the God of the Pokemon world.