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so the diary basically explains how there was a sick little girl, her worrisome older sister who was researching machines to bring out the latent powers of pokemon for bettering humanity, and a mysterious figure threatened the sick little girl to get the big sister to let them use it for the organization's purposes. They tested it first on a magneton, and when it evolved during the test somehow, the three consciousnesses got fused into one body.
The three figures are now the Meteor character ZEL, who had their relevance cut in this build in favour of MORE ACE!!!