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I regret to inform of a bug I don't think I can fix without completely removing a huge convenience for the main game
>Attempting to use the Lower Guild hole warp in TwilightMenu freezes the game in Bidoof's Wish. Performing this action on emulator spawns a dummy 2nd partymember behind you, like a totem pole or the nearby Spoink, but does not crash the game and leaving to the east and reloading the area fixes it.
>The same bug occurs in Sunflora's Special Episode, and is likely a bug due to both Bidoof and Sunflora being alone on the overworld, with no partner following behind them. Don't take this warp in the Special Episodes.