First, let me say this: I think the game looks great and I like most of the models, but there are some that I need to mention:

>Salamence
What the hell, it looks like he is just standing in the air, did they forget to animate his wings or something?
>Wailord
Yeah no, this is absurd. Why is he as big as a Vileplume? Other big Pokemon were not fucked over such as Steelix.
>Purrloin
Why is it standing on two legs? Completely kills it.
>Hitmontop
Couldn't they have made it spin on its head? Looks silly.
>Archeops
Wow how sad, I know it's supposed to be like this but come on, that's just sad.

I'll mention more when I can think of some noteworthy ones.
Talk about 3D models, animations (and maybe Amie I guess)