>>42831226No YOU are, TPC handles the marketing and harmonisation of the franchise (TGC, anime, merch, printed media) for the rightsholders of the Pokémon brand (Nintendo, Game Freak and Creatures) to free up those companies from having to divert their attention to these matters. Furthermore, Game Freak own MAJORITY share in TPC the company (as well as devrights to developing core Pokémon titles), with Nintendo holding the smallest share (30%) due to ALSO holding the master trademarks for everything Pokémon.
In short, NO-ONE is or will be able to control Game Freak in regards to how they make their games.